Back to search

Peptide record

TPDB16292

Antibacterial standard
136 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB16292
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 136-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
CPDVKWKQYGNKCYRFIKDPNTWSDAKEKCRLISGDLVRIESKEENDFIVANIKGSTSGFWIGLDDTQKENNWQWSSSEGTQSLGNFLNWAPGEPNNDRGDEDCGEIFAKMSKIGKWNDAPCSTKLPYICEIVKLL
Physicochemical Analysis
C686H1046N184O213S7
H
K
15503.38
4.86
18
21
43
-3
31.47
-0.757
63.82
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
43345
279.58
40
Residue Composition
number
5
A
4
R
11
N
11
D
6
C
10
E
4
Q
11
G
0
H
10
I
8
L
14
K
1
M
5
F
6
P
11
S
5
T
7
W
3
Y
4
V
Amino Acid Distribution
A: 5 R: 4 N: 11 D: 11 C: 6 E: 10 Q: 4 G: 11 H: 0 I: 10 L: 8 K: 14 M: 1 F: 5 P: 6 S: 11 T: 5 W: 7 Y: 3 V: 4
Chemical Descriptors
136
C686H1046N184O213S7
15503.38
4.86
-3
31.47
-0.757
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.