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Peptide record

TPDB16274

Antibacterial standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB16274
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 13-aa standard-residue antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
IGKLFKRIVQLIL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C75H133N19O15
ANDCEHMPSTWY
IL
1541.00
11.64
3
0
8
+3
-0.46
1.208
202.31
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
0
0.00
1
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
0
E
1
Q
1
G
0
H
3
I
3
L
2
K
0
M
1
F
0
P
0
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 1 H: 0 I: 3 L: 3 K: 2 M: 0 F: 1 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
13 reviewed residue count
C75H133N19O15 sequence-only estimate (linear, free termini)
1541.00 sequence-only estimate (linear, free termini)
11.64 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
-0.46 sequence-only estimate (linear, free termini)
1.208 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.