Back to search

Peptide record

TPDB16248

Antibacterial standard
48 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB16248
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 48-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
GRSPPQCQYTNCAAVLCPAVYCANAYTPPCGCCDICPPQKYGGGYRPR
Physicochemical Analysis
C218H331N63O64S8
EHMFW
CP
5114.89
8.09
4
1
14
+3
3.09
-0.337
38.75
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
7950
155.43
21
Residue Composition
number
5
A
3
R
2
N
1
D
8
C
0
E
3
Q
5
G
0
H
1
I
1
L
1
K
0
M
0
F
8
P
1
S
2
T
0
W
5
Y
2
V
Amino Acid Distribution
A: 5 R: 3 N: 2 D: 1 C: 8 E: 0 Q: 3 G: 5 H: 0 I: 1 L: 1 K: 1 M: 0 F: 0 P: 8 S: 1 T: 2 W: 0 Y: 5 V: 2
Chemical Descriptors
48
C218H331N63O64S8
5114.89
8.09
+3
3.09
-0.337
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.