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Peptide record

TPDB16246

Antibacterial standard
487 amino acids
Basic Information
3D PDB MODEL
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TPDB16246
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 487-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
ADDRNPLEECFRETDYEEFLEIAKNGLSTTSNPKRVVIVGAGMSGLSAAYVLANAGHQVTVLEASERAGGRVKTYRNEKEGWYANLGPMRLPEKHRIVREYIKKFDLRLNEFSQENENAWYFLQNIKKRVREVNKDPGVLEYPVKPSEVGKSAGQLYEESLRKAVEELRRTNCSYMLNKYDTYSTKEYLLKEGNLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVGGMDKLPTSMYQAIQEKVHLNARVIEIQQDVKEVTVTYQTSQKETLSVTADYVIVCTTSRAARRITFEPPLPPKKAHALLSVHYRSGTKIFLTCTKKFWEDDGIHGGKSTTDLPSRFIYYPNHNFPNGVGVIIAYGIGDDANYFQALDFEDCGDIVINDLSLIHQLPKEEIQAICRPSMIQRWSLDNYAMGGITTFTPYHFQHFSEALTAPVDRIYFAGEYTAQAHGWIDSTIKSGLRAATDVNRASENK
Physicochemical Analysis
C2467H3820N668O750S14
E
55286.34
5.68
70
68
192
-9
122.78
-0.483
79.30
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
68105
123.19
132
Residue Composition
number
35
A
27
R
24
N
28
D
6
C
40
E
16
Q
32
G
12
H
30
I
37
L
31
K
8
M
19
F
20
P
30
S
29
T
5
W
27
Y
31
V
Amino Acid Distribution
A: 35 R: 27 N: 24 D: 28 C: 6 E: 40 Q: 16 G: 32 H: 12 I: 30 L: 37 K: 31 M: 8 F: 19 P: 20 S: 30 T: 29 W: 5 Y: 27 V: 31
Chemical Descriptors
487
C2467H3820N668O750S14
55286.34
5.68
-9
122.78
-0.483
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.