Back to search

Peptide record

TPDB16212

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB16212
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 20-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
AVPLIYKRPGVYVTKRPKGK
Physicochemical Analysis
C107H180N30O24
NDCEQHMFSW
K
2270.79
11.06
6
0
8
+6
4.38
-0.540
87.50
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
2980
131.23
3
Residue Composition
number
1
A
2
R
0
N
0
D
0
C
0
E
0
Q
2
G
0
H
1
I
1
L
4
K
0
M
0
F
3
P
0
S
1
T
0
W
2
Y
3
V
Amino Acid Distribution
A: 1 R: 2 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 1 L: 1 K: 4 M: 0 F: 0 P: 3 S: 0 T: 1 W: 0 Y: 2 V: 3
Chemical Descriptors
20
C107H180N30O24
2270.79
11.06
+6
4.38
-0.540
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.