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Peptide record

TPDB16168

Antibacterial standard
179 amino acids
Basic Information
3D PDB MODEL
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TPDB16168
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 179-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
DDNDATDGVEGRSRSKAESGKKESRFFGGLGGFDPVGGLGGGFGLGGGLGGLDGGFGVNPTLGGGFGFNPALAGGFGVNPAFGGVNPAFTPVAPPSTCRYWCRTPEGQAYCCENINQPQSAAGVVKPGFCPPVRPVCPLRSFQPPFTCSNDGACGGIDKCCFDRCLGEHVCKAPLGIGR
Physicochemical Analysis
C790H1197N227O238S12
M
G
18067.29
6.62
16
15
53
-0
23.20
-0.177
52.85
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
9230
51.09
40
Residue Composition
number
12
A
9
R
8
N
9
D
12
C
6
E
4
Q
39
G
1
H
3
I
10
L
6
K
0
M
14
F
18
P
8
S
6
T
1
W
2
Y
11
V
Amino Acid Distribution
A: 12 R: 9 N: 8 D: 9 C: 12 E: 6 Q: 4 G: 39 H: 1 I: 3 L: 10 K: 6 M: 0 F: 14 P: 18 S: 8 T: 6 W: 1 Y: 2 V: 11
Chemical Descriptors
179
C790H1197N227O238S12
18067.29
6.62
-0
23.20
-0.177
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.