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Peptide record

TPDB16158

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB16158
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
EWGRRMMGWGRGRRMMRRWW
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C119H181N45O23S4
ANDCQHILKFPSTYV
R
2738.27
12.80
7
1
8
+6
4.44
-1.630
0.00
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
22000
8.03
0
Residue Composition
number
0
A
7
R
0
N
0
D
0
C
1
E
0
Q
4
G
0
H
0
I
0
L
0
K
4
M
0
F
0
P
0
S
0
T
4
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 7 N: 0 D: 0 C: 0 E: 1 Q: 0 G: 4 H: 0 I: 0 L: 0 K: 0 M: 4 F: 0 P: 0 S: 0 T: 0 W: 4 Y: 0 V: 0
Chemical Descriptors
20 reviewed residue count
C119H181N45O23S4 sequence-only estimate (linear, free termini)
2738.27 sequence-only estimate (linear, free termini)
12.80 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
4.44 sequence-only estimate (linear, free termini)
-1.630 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.