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Peptide record

TPDB16133

Antibacterial Antifungal standard
24 amino acids
Basic Information
3D PDB MODEL
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TPDB16133
Antibacterial Antifungal
Anti-infective peptides
dbAMP Peptipedia CAFPdb
standard
No
A 24-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from dbAMP, Peptipedia, and CAFPdb, with an available 3D structural model.
Sequence
FLGAIAGVAAKVLPKVFCFITKKC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C121H198N28O26S2
RNDEQHMSWY
AK
2525.20
10.17
4
0
14
+4
-1.15
1.296
117.92
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
125
0.05
3
Residue Composition
number
4
A
0
R
0
N
0
D
2
C
0
E
0
Q
2
G
0
H
2
I
2
L
4
K
0
M
3
F
1
P
0
S
1
T
0
W
0
Y
3
V
Amino Acid Distribution
A: 4 R: 0 N: 0 D: 0 C: 2 E: 0 Q: 0 G: 2 H: 0 I: 2 L: 2 K: 4 M: 0 F: 3 P: 1 S: 0 T: 1 W: 0 Y: 0 V: 3
Chemical Descriptors
24 reviewed residue count
C121H198N28O26S2 sequence-only estimate (linear, free termini)
2525.20 sequence-only estimate (linear, free termini)
10.17 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
-1.15 sequence-only estimate (linear, free termini)
1.296 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb