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Peptide record

TPDB15989

Antibacterial standard
11 amino acids
Basic Information
3D PDB MODEL
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TPDB15989
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 11-aa standard-residue antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
CQTDVCQRTIC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C48H84N16O18S3
ANEGHLKMFPSWY
C
1269.47
5.86
1
1
2
-0
2.46
-0.018
61.82
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
125
0.10
7
Residue Composition
number
0
A
1
R
0
N
1
D
3
C
0
E
2
Q
0
G
0
H
1
I
0
L
0
K
0
M
0
F
0
P
0
S
2
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 1 C: 3 E: 0 Q: 2 G: 0 H: 0 I: 1 L: 0 K: 0 M: 0 F: 0 P: 0 S: 0 T: 2 W: 0 Y: 0 V: 1
Chemical Descriptors
11 reviewed residue count
C48H84N16O18S3 sequence-only estimate (linear, free termini)
1269.47 sequence-only estimate (linear, free termini)
5.86 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
2.46 sequence-only estimate (linear, free termini)
-0.018 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.