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Peptide record

TPDB15978

Antibacterial Toxicity standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB15978
Antibacterial Toxicity
Anti-infective peptides Toxicity and safety peptides
dbAMP Peptipedia
standard
No
A 12-aa standard-residue multi-activity (Antibacterial and Toxicity) peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
VGSNLRLLHQWK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C66H107N21O16
ADCEIMFPTY
L
1450.71
11.49
3
0
5
+2
1.55
-0.425
121.67
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
5500
3.79
3
Residue Composition
number
0
A
1
R
1
N
0
D
0
C
0
E
1
Q
1
G
1
H
0
I
3
L
1
K
0
M
0
F
0
P
1
S
0
T
1
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 1 D: 0 C: 0 E: 0 Q: 1 G: 1 H: 1 I: 0 L: 3 K: 1 M: 0 F: 0 P: 0 S: 1 T: 0 W: 1 Y: 0 V: 1
Chemical Descriptors
12 reviewed residue count
C66H107N21O16 sequence-only estimate (linear, free termini)
1450.71 sequence-only estimate (linear, free termini)
11.49 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
1.55 sequence-only estimate (linear, free termini)
-0.425 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP