Back to search

Peptide record

TPDB15831

Antibacterial standard
1256 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB15831
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 1256-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
MKLFLLLLAVAYANAAHDPVRWCVTSECELQKCERMVTEFRYNMGEPHWEWTCVLATSTEQCMKWVDLGFADVVMTKGEDIYTGMRNYHLKPILYELPELKQLGVSKHMKSWESISLAVVPKSSPISTWRDLEGKTTCHASVYEPTSFKLPVCHMIHHDIIPHKGNMMESFVHFFEKSCVPGILKSYLNYNRTIPSTLCELCGSEDREYCHEYLEKYSGLEGASRCLTEGKGQVTFLPHHYIDSFIEKFGRDYKLVCRDNTEELDSWHVKSCHMGYLPRPTLLCSHKASQEYINTVQTLLINAVKTFSSKVRTFDMFSSDEESYYCKPHLKKDLIFQDTCRDLVRIDSEKQFASDFFQIYDTCHALKPKPTARFCVFHKESYHKCLSMQKYFMKTEKVNEISWGCVLATSQMECMKMVHNGTCDIVSTDAMETFIGGKEFLLQPFMSQYFDVFKTPIDGKKVYDHNIYTYTVGVMLKDTVRRRFGHHETWVNLKDLNTCHAGISHPSSFQYPIGWLLANGTIPRIGSIFESVDKYFKHSCLPGAMHWNMTKDLILGYEFNYGYNHTFFANFTDWYMWNIPSTWTWFTYQNVTPSFMRHFYPIEKEVEHYTEYTTLPYFKDMPVELISKLKTHVPVSFFKQFIHPLTQHLKYYNFHDKETPVFTPEYIKEMLTPELMKNMITPEFLKTIFTPEILQQLDFPKHLMSMPTSTMYNEKPLPHTVVPYMMTHIFPTTILPKVMTQVLYQTILPYITFTPSVFEQVMPLLQSHMYFQFQTYLPELLPKILIECMPILEEQLTVEPWKSPLINVLPVMTQYLTMMETPVFKTFVNRYTNPIWKQPYYETFLQRMMEHRENLCESCSGYKDHRCTETVSEPFYHYKGSMHCLKDLRGDITFLESHLIEDLIKDVEIRKRDIMLVCPNGKTIQYVDHKSILKCHFGYVPMPVMMTSHLRDGIWRWKVTKALLEAQKIFSTSSQNEFGFSMFGEHSCFYHKCIQLSPISLVNQTYEITMGPMLMHSLEALILPSTFEYHPYINKYTAHGQTFSNVVFQRNGTCNAVVQDLTCYGESINRTVFINRVGKKIPYNVRMCSRPTTFARKYVEFMCETGLGYIKSVMVPTACEYVPCDETVYVPTWSVDEYWKLPEHRYESERWERDMWLHRLWGNEQYWIRHELSHNWFNDIQVPETQITVTPFGTCTRLHESYLDIFVPKHTSALTSILRQKTIKKSVTEVCEYRWDGFYWHPEWMHMHMPMRMIHH
Physicochemical Analysis
C6748H10169N1707O1861S102
T
148254.42
6.69
189
136
507
-6
212.65
-0.300
73.11
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
266425
179.71
374
Residue Composition
number
29
A
44
R
41
N
47
D
42
C
89
E
41
Q
47
G
63
H
69
I
101
L
82
K
60
M
71
F
73
P
78
S
102
T
29
W
70
Y
78
V
Amino Acid Distribution
A: 29 R: 44 N: 41 D: 47 C: 42 E: 89 Q: 41 G: 47 H: 63 I: 69 L: 101 K: 82 M: 60 F: 71 P: 73 S: 78 T: 102 W: 29 Y: 70 V: 78
Chemical Descriptors
1256
C6748H10169N1707O1861S102
148254.42
6.69
-6
212.65
-0.300
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.