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Peptide record

TPDB15708

Antibacterial standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB15708
Antibacterial
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 12-aa standard-residue antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
WKKLFKKILKYL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C83H134N18O14
ARNDCEQGHMPSTV
K
1608.09
10.77
5
0
7
+5
0.24
-0.250
130.00
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
6990
4.35
1
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
3
L
5
K
0
M
1
F
0
P
0
S
0
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 3 K: 5 M: 0 F: 1 P: 0 S: 0 T: 0 W: 1 Y: 1 V: 0
Chemical Descriptors
12 reviewed residue count
C83H134N18O14 sequence-only estimate (linear, free termini)
1608.09 sequence-only estimate (linear, free termini)
10.77 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
0.24 sequence-only estimate (linear, free termini)
-0.250 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.