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Peptide record

TPDB15705

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB15705
Antibacterial
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
KVWTLFRAAGKLMAK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C81H134N22O17S1
NDCEQHIPSY
AK
1720.15
11.73
4
0
9
+4
0.42
0.247
91.33
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
5500
3.20
1
Residue Composition
number
3
A
1
R
0
N
0
D
0
C
0
E
0
Q
1
G
0
H
0
I
2
L
3
K
1
M
1
F
0
P
0
S
1
T
1
W
0
Y
1
V
Amino Acid Distribution
A: 3 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 0 L: 2 K: 3 M: 1 F: 1 P: 0 S: 0 T: 1 W: 1 Y: 0 V: 1
Chemical Descriptors
15 reviewed residue count
C81H134N22O17S1 sequence-only estimate (linear, free termini)
1720.15 sequence-only estimate (linear, free termini)
11.73 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
0.42 sequence-only estimate (linear, free termini)
0.247 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.