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Peptide record

TPDB15691

Antibacterial standard
14 amino acids
Basic Information
3D PDB MODEL
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TPDB15691
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 14-aa standard-residue antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
YLLPIVGNLLKSLL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C76H130N16O18
ARDCEQHMFTW
L
1555.96
9.74
1
0
9
+1
-1.69
1.429
215.71
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
1490
0.96
3
Residue Composition
number
0
A
0
R
1
N
0
D
0
C
0
E
0
Q
1
G
0
H
1
I
6
L
1
K
0
M
0
F
1
P
1
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 1 L: 6 K: 1 M: 0 F: 0 P: 1 S: 1 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
14 reviewed residue count
C76H130N16O18 sequence-only estimate (linear, free termini)
1555.96 sequence-only estimate (linear, free termini)
9.74 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-1.69 sequence-only estimate (linear, free termini)
1.429 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.