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Peptide record

TPDB15474

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB15474
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
RLIDISNILQSRTCA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C71H127N23O23S1
EGHKMFPWYV
I
1702.99
9.01
2
1
6
+1
2.16
0.240
136.67
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
0
0.00
6
Residue Composition
number
1
A
2
R
1
N
1
D
1
C
0
E
1
Q
0
G
0
H
3
I
2
L
0
K
0
M
0
F
0
P
2
S
1
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 2 N: 1 D: 1 C: 1 E: 0 Q: 1 G: 0 H: 0 I: 3 L: 2 K: 0 M: 0 F: 0 P: 0 S: 2 T: 1 W: 0 Y: 0 V: 0
Chemical Descriptors
15 reviewed residue count
C71H127N23O23S1 sequence-only estimate (linear, free termini)
1702.99 sequence-only estimate (linear, free termini)
9.01 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
2.16 sequence-only estimate (linear, free termini)
0.240 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.