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Peptide record

TPDB15446

Antibacterial standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB15446
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 19-aa standard-residue antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
PGGAAGGAAGGAPGGFPGG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C59H87N19O20
RNDCEQHILKMSTWYV
G
1382.46
6.02
0
0
6
-0
-1.13
0.158
26.32
Mammalian: >20 hour Yeast: >20 hour E.coli: ?
0
0.00
0
Residue Composition
number
5
A
0
R
0
N
0
D
0
C
0
E
0
Q
10
G
0
H
0
I
0
L
0
K
0
M
1
F
3
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 5 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 10 H: 0 I: 0 L: 0 K: 0 M: 0 F: 1 P: 3 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
19 reviewed residue count
C59H87N19O20 sequence-only estimate (linear, free termini)
1382.46 sequence-only estimate (linear, free termini)
6.02 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
-1.13 sequence-only estimate (linear, free termini)
0.158 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.