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Peptide record

TPDB15362

Antibacterial Antifungal Toxicity standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB15362
Antibacterial Antifungal Toxicity
Anti-infective peptides Toxicity and safety peptides
dbAMP Peptipedia CAFPdb
standard
No
A 19-aa standard-residue multi-activity (Antibacterial, Antifungal, and Toxicity) peptide sequence curated from dbAMP, Peptipedia, and CAFPdb, with an available 3D structural model.
Sequence
RLYRRLYRRLYRRLYRKKK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C126H214N46O24
ANDCEQGHIMFPSTWV
R
2757.38
12.20
11
0
8
+11
6.15
-1.984
82.11
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
5960
2.16
4
Residue Composition
number
0
A
8
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
4
L
3
K
0
M
0
F
0
P
0
S
0
T
0
W
4
Y
0
V
Amino Acid Distribution
A: 0 R: 8 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 4 K: 3 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 4 V: 0
Chemical Descriptors
19 reviewed residue count
C126H214N46O24 sequence-only estimate (linear, free termini)
2757.38 sequence-only estimate (linear, free termini)
12.20 sequence-only estimate (linear, free termini)
+11 sequence-only estimate (linear, free termini)
6.15 sequence-only estimate (linear, free termini)
-1.984 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb