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Peptide record

TPDB15319

Antibacterial Antifungal standard
108 amino acids
Basic Information
3D PDB MODEL
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TPDB15319
Antibacterial Antifungal
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 108-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
MAFTKFLFVITLITIASAGFVWEDDDDLFPGFSDTFKMREIPEIKSLEFDDIKTHVAGDNEQYTGESKSSYSSSSTVNGKTVSSGGVSELTNDGKAVEEKVMEYKDGD
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C526H803N127O180S3
C
S
11882.09
4.09
11
21
39
-11
1.76
-0.388
65.83
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
9970
0.84
29
Residue Composition
number
5
A
1
R
3
N
11
D
0
C
10
E
1
Q
9
G
1
H
6
I
5
L
9
K
3
M
8
F
2
P
13
S
9
T
1
W
3
Y
8
V
Amino Acid Distribution
A: 5 R: 1 N: 3 D: 11 C: 0 E: 10 Q: 1 G: 9 H: 1 I: 6 L: 5 K: 9 M: 3 F: 8 P: 2 S: 13 T: 9 W: 1 Y: 3 V: 8
Chemical Descriptors
108 reviewed residue count
C526H803N127O180S3 sequence-only estimate (linear, free termini)
11882.09 sequence-only estimate (linear, free termini)
4.09 sequence-only estimate (linear, free termini)
-11 sequence-only estimate (linear, free termini)
1.76 sequence-only estimate (linear, free termini)
-0.388 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP