Back to search

Peptide record

TPDB15317

Antibacterial Antifungal standard
74 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB15317
Antibacterial Antifungal
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 74-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
MSKFILLVCILLLTTNIVSAASKCGRHGDSCVSSSDCCPGTWCHTYANRCQVRITEEELMKQREKILGRKGKDY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C354H584N104O107S9
CLS
8297.70
8.42
13
7
25
+4
1.72
-0.157
82.97
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
8855
1.07
25
Residue Composition
number
3
A
5
R
2
N
3
D
7
C
4
E
2
Q
5
G
2
H
5
I
7
L
6
K
2
M
1
F
1
P
7
S
5
T
1
W
2
Y
4
V
Amino Acid Distribution
A: 3 R: 5 N: 2 D: 3 C: 7 E: 4 Q: 2 G: 5 H: 2 I: 5 L: 7 K: 6 M: 2 F: 1 P: 1 S: 7 T: 5 W: 1 Y: 2 V: 4
Chemical Descriptors
74 reviewed residue count
C354H584N104O107S9 sequence-only estimate (linear, free termini)
8297.70 sequence-only estimate (linear, free termini)
8.42 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.72 sequence-only estimate (linear, free termini)
-0.157 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP