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Peptide record

TPDB15250

Antibacterial standard
16 amino acids
Basic Information
3D PDB MODEL
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TPDB15250
Antibacterial
Anti-infective peptides
dbAMP DRAMP Peptipedia
standard
No
A 16-aa standard-residue antibacterial peptide sequence curated from dbAMP, DRAMP, and Peptipedia, with an available 3D structural model.
Sequence
LFFLPSLIGGLISAIK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C84H137N17O19
RNDCEQHMTWYV
L
1689.11
10.10
1
0
10
+1
-1.98
1.763
176.88
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
0
0.00
2
Residue Composition
number
1
A
0
R
0
N
0
D
0
C
0
E
0
Q
2
G
0
H
3
I
4
L
1
K
0
M
2
F
1
P
2
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 3 L: 4 K: 1 M: 0 F: 2 P: 1 S: 2 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
16 reviewed residue count
C84H137N17O19 sequence-only estimate (linear, free termini)
1689.11 sequence-only estimate (linear, free termini)
10.10 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-1.98 sequence-only estimate (linear, free termini)
1.763 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.