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Peptide record

TPDB15152

Antibacterial standard
345 amino acids
Basic Information
3D PDB MODEL
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TPDB15152
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 345-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
YTRVVWCAVGPEEQKKCQQWSQQSGQNVTCATASTTDDCIVLVLKGEADALNLDGGYIYTAGKCGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKKANEGLTWNSLKDKKSCHTAVDRTAGWNIPMGLIVNQTGSCAFDEFFSQSCAPGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDTVWENTNGESTADWAKNLKREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSRSDRAAHVEQVLLHQQALFGKNGKNCPDKFCLFKSETKNLLFNDNTECLAKLGGRPTYEEYLGTEYVTAIANLKKCSTSPLLEACAF
Physicochemical Analysis
C1640H2580N458O514S21
A
37610.55
6.32
45
41
126
-2
73.61
-0.329
74.67
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
49150
130.68
106
Residue Composition
number
34
A
12
R
19
N
21
D
20
C
20
E
13
Q
25
G
6
H
5
I
33
L
27
K
1
M
11
F
12
P
21
S
23
T
6
W
10
Y
26
V
Amino Acid Distribution
A: 34 R: 12 N: 19 D: 21 C: 20 E: 20 Q: 13 G: 25 H: 6 I: 5 L: 33 K: 27 M: 1 F: 11 P: 12 S: 21 T: 23 W: 6 Y: 10 V: 26
Chemical Descriptors
345
C1640H2580N458O514S21
37610.55
6.32
-2
73.61
-0.329
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.