TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB15116

Activity

Antibacterial

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 32-aa modified antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

XITLSTCAILAKPLGNNGYLCTVTKECMPSCN

FASTA

>TPDB15116|Antibacterial|length=32
XITLSTCAILAKPLGNNGYLCTVTKECMPSCN

Formula C138H232N36O44S5

Absent Amino Acids RDQHFW

Common Amino Acids CLT

Mass 3259.87

PI 7.84

Basic Residues 2

Acidic Residues 1

Hydrophobic Residues 11

Net Charge +1

Boman Index 1.74

Hydrophobicity 0.388

Aliphatic Index 88.44

Half Life

Mammalian: Yeast: E.coli:

Extinction Coefficient Cystines 1740

Absorbance 280nm 53.38

Polar Residues 14

number

2

A

0

R

3

N

0

D

4

C

1

E

0

Q

2

G

0

H

2

I

4

L

2

K

1

M

0

F

2

P

2

S

4

T

0

W

1

Y

1

V

Amino Acid Distribution

A: 2 R: 0 N: 3 D: 0 C: 4 E: 1 Q: 0 G: 2 H: 0 I: 2 L: 4 K: 2 M: 1 F: 0 P: 2 S: 2 T: 4 W: 0 Y: 1 V: 1

Length

32

Formula

C138H232N36O44S5

Mass

3259.87

PI

7.84

Net Charge

+1

Boman Index

1.74

Hydrophobicity

0.388

Evidence 1 Activity

Source & Reference

Database Source dbAMP

Other

Source Activity Label	Source Definition
Antibacterial	dbAMP classified as Antibacterial under the Anti-bacterial function class.