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Peptide record

TPDB15088

Antibacterial standard
456 amino acids
Basic Information
3D PDB MODEL
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TPDB15088
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 456-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
VNPGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSSKLQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHNPPPFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPKESKFRLTTKFFGTFLPEVAKKFPNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLPNSALASLFLIGMHTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGADVVYK
Physicochemical Analysis
C2302H3633N601O646S18
L
50641.89
9.78
62
34
192
+15
73.96
-0.078
91.67
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
31985
63.16
124
Residue Composition
number
26
A
12
R
22
N
16
D
3
C
18
E
21
Q
26
G
14
H
26
I
47
L
36
K
15
M
25
F
32
P
43
S
21
T
2
W
14
Y
37
V
Amino Acid Distribution
A: 26 R: 12 N: 22 D: 16 C: 3 E: 18 Q: 21 G: 26 H: 14 I: 26 L: 47 K: 36 M: 15 F: 25 P: 32 S: 43 T: 21 W: 2 Y: 14 V: 37
Chemical Descriptors
456
C2302H3633N601O646S18
50641.89
9.78
+15
73.96
-0.078
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.