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Peptide record

TPDB15086

Antibacterial standard
255 amino acids
Basic Information
3D PDB MODEL
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TPDB15086
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 255-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
VNPGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHNPPPFAPPVMEFPAAHDRMVY
Physicochemical Analysis
C1261H1993N341O369S12
S
28219.48
9.79
38
19
97
+11
50.21
-0.291
79.49
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
23045
81.66
78
Residue Composition
number
14
A
6
R
13
N
9
D
3
C
10
E
12
Q
15
G
9
H
18
I
17
L
23
K
9
M
11
F
16
P
32
S
10
T
2
W
8
Y
18
V
Amino Acid Distribution
A: 14 R: 6 N: 13 D: 9 C: 3 E: 10 Q: 12 G: 15 H: 9 I: 18 L: 17 K: 23 M: 9 F: 11 P: 16 S: 32 T: 10 W: 2 Y: 8 V: 18
Chemical Descriptors
255
C1261H1993N341O369S12
28219.48
9.79
+11
50.21
-0.291
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.