Back to search

Peptide record

TPDB15057

Antibacterial standard
204 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB15057
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 204-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
VAEKAKDERELLEKTSELIAGMGDKIGEHLGDKYKAIAKDIADNIKNFQGKTIRSFDDAMASLNKITANPAMKINKADRDALVNAWKHVDAQDMANKLGNLSKAFKVADVVMKVEKVREKSIEGYETGNWGPLMLEVESWVLSGIASSVALGIFSATLGAYALSLGVPAIAVGIAGILLAAVVGALIDDKFADALNNEIIRPAH
Physicochemical Analysis
C971H1579N261O293S6
C
A
21790.15
5.59
28
28
99
-3
45.78
0.037
105.34
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
20970
96.24
32
Residue Composition
number
31
A
5
R
11
N
15
D
0
C
13
E
2
Q
16
G
3
H
17
I
19
L
20
K
6
M
5
F
4
P
11
S
5
T
3
W
3
Y
15
V
Amino Acid Distribution
A: 31 R: 5 N: 11 D: 15 C: 0 E: 13 Q: 2 G: 16 H: 3 I: 17 L: 19 K: 20 M: 6 F: 5 P: 4 S: 11 T: 5 W: 3 Y: 3 V: 15
Chemical Descriptors
204
C971H1579N261O293S6
21790.15
5.59
-3
45.78
0.037
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.