Back to search

Peptide record

TPDB14956

Antibacterial standard
334 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB14956
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 334-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
RRRRSVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQLNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAERDEYELLCPDNTRKPVDKFKDCHLARVPSMAVVARSVNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSGYFTAIQNLRKS
Physicochemical Analysis
C1648H2572N476O478S14
A
37150.29
9.20
51
35
124
+13
67.08
-0.436
69.55
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
43150
116.15
85
Residue Composition
number
31
A
28
R
11
N
17
D
12
C
18
E
16
Q
27
G
3
H
12
I
24
L
20
K
2
M
19
F
22
P
24
S
12
T
5
W
10
Y
21
V
Amino Acid Distribution
A: 31 R: 28 N: 11 D: 17 C: 12 E: 18 Q: 16 G: 27 H: 3 I: 12 L: 24 K: 20 M: 2 F: 19 P: 22 S: 24 T: 12 W: 5 Y: 10 V: 21
Chemical Descriptors
334
C1648H2572N476O478S14
37150.29
9.20
+13
67.08
-0.436
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.