Back to search

Peptide record

TPDB14913

Antibacterial Antifungal standard
128 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB14913
Antibacterial Antifungal
Anti-infective peptides
dbAMP Peptipedia Antifungipept CAFPdb
standard
No
A 128-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from dbAMP, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
QYSVGGGYNDVGGGGGSQQCPQERPNLGSCKDYVMERCFTMKDFPLTWPTKWWKGGCEQEVREKCCQQLSQIAPQCRCDAIRGVIQGKLGGIFGIGGGDVFKQIQRAQILPSKCNMGADCKFPSGYYW
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C616H945N175O181S13
H
G
14115.12
8.13
15
11
39
+4
1.50
-0.513
53.28
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
30075
2.13
40
Residue Composition
number
4
A
6
R
3
N
6
D
10
C
5
E
13
Q
21
G
0
H
7
I
5
L
9
K
3
M
5
F
7
P
6
S
3
T
4
W
5
Y
6
V
Amino Acid Distribution
A: 4 R: 6 N: 3 D: 6 C: 10 E: 5 Q: 13 G: 21 H: 0 I: 7 L: 5 K: 9 M: 3 F: 5 P: 7 S: 6 T: 3 W: 4 Y: 5 V: 6
Chemical Descriptors
128 reviewed residue count
C616H945N175O181S13 sequence-only estimate (linear, free termini)
14115.12 sequence-only estimate (linear, free termini)
8.13 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.50 sequence-only estimate (linear, free termini)
-0.513 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept