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Peptide record

TPDB14910

Antibacterial Antifungal standard
97 amino acids
Basic Information
3D PDB MODEL
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TPDB14910
Antibacterial Antifungal
Anti-infective peptides
dbAMP Peptipedia CAFPdb
standard
No
A 97-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from dbAMP, Peptipedia, and CAFPdb, with an available 3D structural model.
Sequence
QYEALVTSILGKLTGLWHNDSVDFMGHICYFRRRPKIRRFKLYHEGKFWCPGWAPFEGRSRTKSRSGSSREATKDFVRKALQNGLVTQQDASLWLNN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C510H784N152O138S3
R
11348.95
10.56
20
8
35
+9
2.37
-0.681
65.36
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
26595
2.34
26
Residue Composition
number
5
A
10
R
4
N
4
D
2
C
4
E
4
Q
8
G
3
H
3
I
9
L
7
K
1
M
6
F
3
P
8
S
5
T
4
W
3
Y
4
V
Amino Acid Distribution
A: 5 R: 10 N: 4 D: 4 C: 2 E: 4 Q: 4 G: 8 H: 3 I: 3 L: 9 K: 7 M: 1 F: 6 P: 3 S: 8 T: 5 W: 4 Y: 3 V: 4
Chemical Descriptors
97 reviewed residue count
C510H784N152O138S3 sequence-only estimate (linear, free termini)
11348.95 sequence-only estimate (linear, free termini)
10.56 sequence-only estimate (linear, free termini)
+9 sequence-only estimate (linear, free termini)
2.37 sequence-only estimate (linear, free termini)
-0.681 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb