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Peptide record

TPDB14899

Antibacterial standard
5 amino acids
Basic Information
3D PDB MODEL
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TPDB14899
Antibacterial
Anti-infective peptides
dbAMP DRAMP Peptipedia
standard
No
A 5-aa standard-residue antibacterial peptide sequence curated from dbAMP, DRAMP, and Peptipedia, with an available 3D structural model.
Sequence
QWGGG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C22H29N7O7
ARNDCEHILKMFPSTYV
G
503.51
6.02
0
0
1
-0
0.08
-1.120
0.00
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
5500
10.92
1
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
1
Q
3
G
0
H
0
I
0
L
0
K
0
M
0
F
0
P
0
S
0
T
1
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 3 H: 0 I: 0 L: 0 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 1 Y: 0 V: 0
Chemical Descriptors
5 reviewed residue count
C22H29N7O7 sequence-only estimate (linear, free termini)
503.51 sequence-only estimate (linear, free termini)
6.02 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
0.08 sequence-only estimate (linear, free termini)
-1.120 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Activity

Antibacterial

Source & Reference

dbAMP DRAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.
Active against M. luteus 10209, S. carnosus LTH1502, S. citreus LC5, S. aureus D48, S. epidermidis Z80, L. plantarum ZJ317, L. monocytogenes LM1, E. coli DH5a, V. parahaemolyticus SCF16, S. flexneri DSM4782, and P. aeruginosa B2.