Back to search

Peptide record

TPDB14877

Antibacterial Anticancer Antifungal Antiparasitic standard
60 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB14877
Antibacterial Anticancer Antifungal Antiparasitic
Anti-infective peptides Cancer-related peptides
dbAMP DRAMP Peptipedia AFP-GFuse Antifp
standard
No
A 60-aa standard-residue multi-activity (Antibacterial, Anticancer, Antifungal, and other sources) peptide sequence curated from dbAMP, DRAMP, Peptipedia, and other sources, with an available 3D structural model.
Sequence
QPRATRKGVTPKQGYCPEFLLDCPFVLLPVCSRDKGCKGTKKCCFYYCQMRCVEPWTTLT
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C305H480N82O82S9
NHI
C
6896.21
8.72
10
4
18
+6
1.50
-0.317
53.50
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
10470
1.52
21
Residue Composition
number
1
A
4
R
0
N
2
D
8
C
2
E
3
Q
4
G
0
H
0
I
5
L
6
K
1
M
3
F
6
P
1
S
6
T
1
W
3
Y
4
V
Amino Acid Distribution
A: 1 R: 4 N: 0 D: 2 C: 8 E: 2 Q: 3 G: 4 H: 0 I: 0 L: 5 K: 6 M: 1 F: 3 P: 6 S: 1 T: 6 W: 1 Y: 3 V: 4
Chemical Descriptors
60 main sequence record
C305H480N82O82S9 sequence-only estimate (linear, free termini)
6896.21 sequence-only estimate (linear, free termini)
8.72 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
1.50 sequence-only estimate (linear, free termini)
-0.317 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP