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Peptide record

TPDB14829

Antibacterial Anticancer Antifungal Antiparasitic standard
52 amino acids
Basic Information
3D PDB MODEL
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TPDB14829
Antibacterial Anticancer Antifungal Antiparasitic
Anti-infective peptides Cancer-related peptides
dbAMP DRAMP Peptipedia Antifp
standard
No
A 52-aa standard-residue multi-activity (Antibacterial, Anticancer, Antifungal, and other sources) peptide sequence curated from dbAMP, DRAMP, Peptipedia, and other sources, with an available 3D structural model.
Sequence
PGDIPPGIRNTVCLMQQGHCRLFMCRSGERKGDICSDPWNRCCVPYSVKDRR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C249H402N82O72S8
A
R
5952.92
8.59
10
5
13
+4
2.69
-0.654
54.23
Mammalian: >20 hour Yeast: >20 hour E.coli: ?
7365
1.24
15
Residue Composition
number
0
A
7
R
2
N
4
D
6
C
1
E
2
Q
5
G
1
H
3
I
2
L
2
K
2
M
1
F
5
P
3
S
1
T
1
W
1
Y
3
V
Amino Acid Distribution
A: 0 R: 7 N: 2 D: 4 C: 6 E: 1 Q: 2 G: 5 H: 1 I: 3 L: 2 K: 2 M: 2 F: 1 P: 5 S: 3 T: 1 W: 1 Y: 1 V: 3
Chemical Descriptors
52 main sequence record
C249H402N82O72S8 sequence-only estimate (linear, free termini)
5952.92 sequence-only estimate (linear, free termini)
8.59 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.69 sequence-only estimate (linear, free termini)
-0.654 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP