Back to search

Peptide record

TPDB14823

Antibacterial standard
125 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB14823
Antibacterial
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 125-aa standard natural antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
PEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Physicochemical Analysis
C608H1015N181O178S2
CW
K
13772.97
10.75
31
10
44
+18
40.80
-0.736
70.32
Mammalian: >20 hour Yeast: >20 hour E.coli: ?
7450
54.09
32
Residue Composition
number
14
A
8
R
3
N
3
D
0
C
7
E
3
Q
7
G
3
H
7
I
6
L
20
K
2
M
2
F
6
P
13
S
8
T
0
W
5
Y
8
V
Amino Acid Distribution
A: 14 R: 8 N: 3 D: 3 C: 0 E: 7 Q: 3 G: 7 H: 3 I: 7 L: 6 K: 20 M: 2 F: 2 P: 6 S: 13 T: 8 W: 0 Y: 5 V: 8
Chemical Descriptors
125
C608H1015N181O178S2
13772.97
10.75
+18
40.80
-0.736
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.