TPDB

3D PDB MODEL

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TPDB ID TPDB14677

Activity

Antibacterial

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 27-aa modified antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

MELKASEFGVVLSVDALKLSRQSPLGX

FASTA

>TPDB14677|Antibacterial|length=27
MELKASEFGVVLSVDALKLSRQSPLGX

Formula C123H208N32O38S1

Absent Amino Acids NCHITWY

Common Amino Acids L

Mass 2775.26

PI 7.10

Basic Residues 3

Acidic Residues 3

Hydrophobic Residues 12

Net Charge +0

Boman Index 5.34

Hydrophobicity 0.296

Aliphatic Index 111.85

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 5

number

2

A

1

R

0

N

1

D

0

C

2

E

1

Q

2

G

0

H

0

I

5

L

2

K

1

M

1

F

1

P

4

S

0

T

0

W

0

Y

3

V

Amino Acid Distribution

A: 2 R: 1 N: 0 D: 1 C: 0 E: 2 Q: 1 G: 2 H: 0 I: 0 L: 5 K: 2 M: 1 F: 1 P: 1 S: 4 T: 0 W: 0 Y: 0 V: 3

Length

27

Formula

C123H208N32O38S1

Mass

2775.26

PI

7.10

Net Charge

+0

Boman Index

5.34

Hydrophobicity

0.296

Evidence 1 Activity

Source & Reference

Database Source dbAMP

Other

Source Activity Label	Source Definition
Antibacterial	dbAMP classified as Antibacterial under the Anti-bacterial function class.