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Peptide record

TPDB14676

Antibacterial Antifungal standard
117 amino acids
Basic Information
3D PDB MODEL
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TPDB14676
Antibacterial Antifungal
Anti-infective peptides
dbAMP Peptipedia Antifungipept CAFPdb
standard
No
A 117-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from dbAMP, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
MEKKTAYCLLFLVLLVPYTALGAVLKRAPAKKEKRAVPLAVPLVYWGASVSPAVWNWLLVTFGAAAVAAAAVTVSDNDSHSCANNRGWCRSRCFSHEYIDSWHSDVCGSYDCCRPRY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C583H893N159O158S8
Q
A
12913.95
8.62
16
8
57
+5
0.93
0.155
86.75
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
36815
2.85
31
Residue Composition
number
17
A
7
R
4
N
5
D
7
C
3
E
0
Q
5
G
3
H
1
I
11
L
6
K
1
M
3
F
6
P
10
S
4
T
5
W
6
Y
13
V
Amino Acid Distribution
A: 17 R: 7 N: 4 D: 5 C: 7 E: 3 Q: 0 G: 5 H: 3 I: 1 L: 11 K: 6 M: 1 F: 3 P: 6 S: 10 T: 4 W: 5 Y: 6 V: 13
Chemical Descriptors
117 reviewed residue count
C583H893N159O158S8 sequence-only estimate (linear, free termini)
12913.95 sequence-only estimate (linear, free termini)
8.62 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
0.93 sequence-only estimate (linear, free termini)
0.155 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept