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Peptide record

TPDB14611

Antibacterial standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB14611
Antibacterial
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 17-aa standard-residue antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
KWYFRVYYRGIYYRRYR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C123H170N34O24
ANDCEQHLMPST
Y
2508.92
10.55
6
0
10
+6
3.87
-1.412
40.00
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
14440
5.76
6
Residue Composition
number
0
A
5
R
0
N
0
D
0
C
0
E
0
Q
1
G
0
H
1
I
0
L
1
K
0
M
1
F
0
P
0
S
0
T
1
W
6
Y
1
V
Amino Acid Distribution
A: 0 R: 5 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 1 L: 0 K: 1 M: 0 F: 1 P: 0 S: 0 T: 0 W: 1 Y: 6 V: 1
Chemical Descriptors
17 reviewed residue count
C123H170N34O24 sequence-only estimate (linear, free termini)
2508.92 sequence-only estimate (linear, free termini)
10.55 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
3.87 sequence-only estimate (linear, free termini)
-1.412 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.