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Peptide record

TPDB14420

Antibacterial standard
244 amino acids
Basic Information
3D PDB MODEL
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TPDB14420
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 244-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
IIGGSMDAKGSFPWQAKMISRHGLTTGATLISDQWLLTTAQNLFLNHSENATAKDIAPTLTLYVGKNQLVEIEKVVLHPERSVVDIGLIKLKQKVLVTEKVMPICLPSKDYVAPGRMGYVSGWGRNVNFRFTERLKYVMPVADQEKCELHYEKSTVPEKKGAVSPVGVQPILNKHTFCAGLTKYEEDTCYGDAGSAFAVHDTEEDTWYAAGILSFDKSCAVAEYGVYVRATDLKDWVQETMAKN
Physicochemical Analysis
C1213H1902N318O360S11
V
27053.02
6.34
33
29
102
-2
50.89
-0.198
85.08
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
42650
157.65
62
Residue Composition
number
20
A
7
R
8
N
13
D
5
C
16
E
8
Q
18
G
6
H
11
I
20
L
20
K
6
M
7
F
10
P
13
S
18
T
5
W
10
Y
23
V
Amino Acid Distribution
A: 20 R: 7 N: 8 D: 13 C: 5 E: 16 Q: 8 G: 18 H: 6 I: 11 L: 20 K: 20 M: 6 F: 7 P: 10 S: 13 T: 18 W: 5 Y: 10 V: 23
Chemical Descriptors
244
C1213H1902N318O360S11
27053.02
6.34
-2
50.89
-0.198
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.