Back to search

Peptide record

TPDB14417

Antibacterial standard
245 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB14417
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 245-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
IIGGSMDAKGSFPWQAKMISRHGLTTGATLISDQWLLTTAKNLFLNHSETASAKDITPTLTLYVGKNQLVEIEKVVLHPNHSVVDIGLIKLKQRVLVTERVMPICLPSKDYIAPGRVGYVSGWGRNANFRFTDRLKYVMLPVADQDKCVVHYENSTVPEKKNLTSPVGVQPILNEHTFCAGLTKYQEDTCYGDAGSAFAIHDMEEDTWYAAGILSFDKSCAVAEYGVYVRATDLKDWVQETMAKN
Physicochemical Analysis
C1218H1907N323O361S11
V
27204.15
6.42
32
27
103
-2
44.09
-0.158
87.92
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
42650
156.78
66
Residue Composition
number
19
A
8
R
10
N
15
D
5
C
12
E
8
Q
17
G
7
H
13
I
21
L
17
K
6
M
7
F
10
P
14
S
19
T
5
W
10
Y
22
V
Amino Acid Distribution
A: 19 R: 8 N: 10 D: 15 C: 5 E: 12 Q: 8 G: 17 H: 7 I: 13 L: 21 K: 17 M: 6 F: 7 P: 10 S: 14 T: 19 W: 5 Y: 10 V: 22
Chemical Descriptors
245
C1218H1907N323O361S11
27204.15
6.42
-2
44.09
-0.158
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.