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Peptide record

TPDB14413

Antibacterial standard
245 amino acids
Basic Information
3D PDB MODEL
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TPDB14413
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 245-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
IIGGSLDAKGSFPWQAKMVSHHNLISGATLINERWLLTTAKNLYLGHTSDKKAKDIAPTLRLYVGKNQPVEVEKVVLHPDRSKVDIGLIKLRQKVPVNEKVMPICLPSKDYVAVGRVGYVSGWGRNANFNFTEHLKYIMLPVADQDKCVEHYENSTVPENKTDKSPVGVQPILNKNTFCVGLSKYQEDTCYGDAGSAFVVHDQEDDTWYAAGILSFDKSCAVAEYGVYVKVTSILDWVRKTIADN
Physicochemical Analysis
C1225H1919N327O361S8
V
27260.17
7.74
36
28
100
+1
51.95
-0.262
89.43
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
44140
161.92
64
Residue Composition
number
16
A
7
R
13
N
17
D
5
C
11
E
7
Q
17
G
7
H
13
I
19
L
22
K
3
M
6
F
11
P
15
S
13
T
5
W
11
Y
27
V
Amino Acid Distribution
A: 16 R: 7 N: 13 D: 17 C: 5 E: 11 Q: 7 G: 17 H: 7 I: 13 L: 19 K: 22 M: 3 F: 6 P: 11 S: 15 T: 13 W: 5 Y: 11 V: 27
Chemical Descriptors
245
C1225H1919N327O361S8
27260.17
7.74
+1
51.95
-0.262
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.