Back to search

Peptide record

TPDB14412

Antibacterial standard
235 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB14412
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 235-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRTTMRSFKLLDQMETPL
Physicochemical Analysis
C1157H1881N383O328S11
R
26757.69
11.76
44
16
81
+22
50.47
-0.562
78.38
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
24325
90.91
66
Residue Composition
number
13
A
34
R
11
N
8
D
6
C
8
E
16
Q
20
G
6
H
13
I
19
L
4
K
5
M
7
F
13
P
15
S
13
T
3
W
5
Y
16
V
Amino Acid Distribution
A: 13 R: 34 N: 11 D: 8 C: 6 E: 8 Q: 16 G: 20 H: 6 I: 13 L: 19 K: 4 M: 5 F: 7 P: 13 S: 15 T: 13 W: 3 Y: 5 V: 16
Chemical Descriptors
235
C1157H1881N383O328S11
26757.69
11.76
+22
50.47
-0.562
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.