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Peptide record

TPDB14403

Antibacterial Antifungal standard
89 amino acids
Basic Information
3D PDB MODEL
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TPDB14403
Antibacterial Antifungal
Anti-infective peptides
dbAMP Peptipedia Antifungipept CAFPdb
standard
No
A 89-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from dbAMP, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
HQELCTKGDDALVTELECIRLRISPETNAAFDNAVQQLNCLNRACAYRKMCATNNLEQAMSVYFTNEQIKEIHDAATACDPEAHHEHDH
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C423H664N128O142S8
W
A
10071.18
4.84
13
15
32
-8
2.33
-0.587
71.46
Mammalian: 3.5 hour Yeast: 10 min E.coli: >10 hour
3355
0.33
28
Residue Composition
number
12
A
4
R
7
N
6
D
6
C
9
E
5
Q
1
G
6
H
4
I
7
L
3
K
2
M
2
F
2
P
2
S
6
T
0
W
2
Y
3
V
Amino Acid Distribution
A: 12 R: 4 N: 7 D: 6 C: 6 E: 9 Q: 5 G: 1 H: 6 I: 4 L: 7 K: 3 M: 2 F: 2 P: 2 S: 2 T: 6 W: 0 Y: 2 V: 3
Chemical Descriptors
89 reviewed residue count
C423H664N128O142S8 sequence-only estimate (linear, free termini)
10071.18 sequence-only estimate (linear, free termini)
4.84 sequence-only estimate (linear, free termini)
-8 sequence-only estimate (linear, free termini)
2.33 sequence-only estimate (linear, free termini)
-0.587 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept