Back to search

Peptide record

TPDB14373

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB14373
Antibacterial
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
GVCRAVCRRGVCRAVCRR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C78H146N36O19S4
NDEQHILKMFPSTWY
R
2020.49
11.71
6
0
6
+6
3.49
0.144
75.56
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
250
0.12
4
Residue Composition
number
2
A
6
R
0
N
0
D
4
C
0
E
0
Q
2
G
0
H
0
I
0
L
0
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
4
V
Amino Acid Distribution
A: 2 R: 6 N: 0 D: 0 C: 4 E: 0 Q: 0 G: 2 H: 0 I: 0 L: 0 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 4
Chemical Descriptors
18 reviewed residue count
C78H146N36O19S4 sequence-only estimate (linear, free termini)
2020.49 sequence-only estimate (linear, free termini)
11.71 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
3.49 sequence-only estimate (linear, free termini)
0.144 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.