Back to search

Peptide record

TPDB14346

Antibacterial standard
691 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB14346
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 691-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
GRRRSVQWCAVSNPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQLNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLKDGAGDVAFIRESTVFEDLSDEAERDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSGYFTAIQNLRKSEEEVAARRARVVWCAVGEQELRKCNQWSGLSEGSVTCSSASTTEDCIALVLKGEADAMSLDGGYVYTAGKCGLVPVLAENYKSAQSSDPDPNCVDRPVEGYLAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFDEYFSQSCAPGSDPASNLCALCIGDEEGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQNTDGNNNEAWAKDLKLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRMDKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQSETKNLLFNDNTECLARLHGKTTYEKYLGPQYVAGITNLKKCSTSPLLEACEFLRK
Physicochemical Analysis
C3332H5220N950O1013S37
A
75982.08
7.85
97
80
253
+7
149.75
-0.398
71.32
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
88290
116.20
193
Residue Composition
number
65
A
42
R
33
N
38
D
32
C
42
E
26
Q
54
G
9
H
16
I
58
L
46
K
5
M
30
F
35
P
50
S
31
T
10
W
21
Y
48
V
Amino Acid Distribution
A: 65 R: 42 N: 33 D: 38 C: 32 E: 42 Q: 26 G: 54 H: 9 I: 16 L: 58 K: 46 M: 5 F: 30 P: 35 S: 50 T: 31 W: 10 Y: 21 V: 48
Chemical Descriptors
691
C3332H5220N950O1013S37
75982.08
7.85
+7
149.75
-0.398
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.