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Peptide record

TPDB14344

Antibacterial standard
344 amino acids
Basic Information
3D PDB MODEL
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TPDB14344
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 344-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
GRRRRSVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQLNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAERDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSGYFTAIQNLRKSEEEVAARRA
Physicochemical Analysis
C1692H2642N494O494S13
A
38225.38
9.07
54
38
127
+12
75.52
-0.468
69.24
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
43150
112.88
85
Residue Composition
number
34
A
30
R
11
N
17
D
12
C
21
E
16
Q
28
G
4
H
12
I
24
L
20
K
1
M
19
F
22
P
24
S
12
T
5
W
10
Y
22
V
Amino Acid Distribution
A: 34 R: 30 N: 11 D: 17 C: 12 E: 21 Q: 16 G: 28 H: 4 I: 12 L: 24 K: 20 M: 1 F: 19 P: 22 S: 24 T: 12 W: 5 Y: 10 V: 22
Chemical Descriptors
344
C1692H2642N494O494S13
38225.38
9.07
+12
75.52
-0.468
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.