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Peptide record

TPDB14343

Antibacterial standard
334 amino acids
Basic Information
3D PDB MODEL
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TPDB14343
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 334-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
GRRRRSVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQLNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIEESTVFEDLSDEAERDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSGYFTAIQNLRK
Physicochemical Analysis
C1647H2563N475O479S13
A
37099.14
8.94
51
36
123
+11
69.36
-0.447
69.55
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
43150
116.31
84
Residue Composition
number
31
A
27
R
11
N
17
D
12
C
19
E
16
Q
28
G
4
H
12
I
24
L
20
K
1
M
19
F
22
P
23
S
12
T
5
W
10
Y
21
V
Amino Acid Distribution
A: 31 R: 27 N: 11 D: 17 C: 12 E: 19 Q: 16 G: 28 H: 4 I: 12 L: 24 K: 20 M: 1 F: 19 P: 22 S: 23 T: 12 W: 5 Y: 10 V: 21
Chemical Descriptors
334
C1647H2563N475O479S13
37099.14
8.94
+11
69.36
-0.447
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.