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Peptide record

TPDB14333

Antibacterial standard
179 amino acids
Basic Information
3D PDB MODEL
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TPDB14333
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 179-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
GQDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNAILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLGNIKSYPGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCIDG
Physicochemical Analysis
C939H1447N243O270S4
K
20588.53
9.38
25
18
68
+5
33.50
-0.479
78.32
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
26025
126.41
56
Residue Composition
number
5
A
7
R
10
N
9
D
2
C
9
E
11
Q
11
G
2
H
10
I
15
L
16
K
2
M
11
F
11
P
13
S
10
T
2
W
10
Y
13
V
Amino Acid Distribution
A: 5 R: 7 N: 10 D: 9 C: 2 E: 9 Q: 11 G: 11 H: 2 I: 10 L: 15 K: 16 M: 2 F: 11 P: 11 S: 13 T: 10 W: 2 Y: 10 V: 13
Chemical Descriptors
179
C939H1447N243O270S4
20588.53
9.38
+5
33.50
-0.479
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.