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Peptide record

TPDB14229

Antibacterial standard
10 amino acids
Basic Information
3D PDB MODEL
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TPDB14229
Antibacterial
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 10-aa standard-residue antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
GGAGHVPEYF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C48H64N12O14
RNDCQILKMSTW
G
1033.11
5.13
1
1
4
-1
-0.00
-0.200
39.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
1490
1.44
1
Residue Composition
number
1
A
0
R
0
N
0
D
0
C
1
E
0
Q
3
G
1
H
0
I
0
L
0
K
0
M
1
F
1
P
0
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 0 E: 1 Q: 0 G: 3 H: 1 I: 0 L: 0 K: 0 M: 0 F: 1 P: 1 S: 0 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
10 reviewed residue count
C48H64N12O14 sequence-only estimate (linear, free termini)
1033.11 sequence-only estimate (linear, free termini)
5.13 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
-0.00 sequence-only estimate (linear, free termini)
-0.200 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.