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Peptide record

TPDB14158

Antibacterial standard
10 amino acids
Basic Information
3D PDB MODEL
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TPDB14158
Antibacterial
Anti-infective peptides
dbAMP DRAMP Peptipedia
standard
No
A 10-aa standard-residue antibacterial peptide sequence curated from dbAMP, DRAMP, and Peptipedia, with an available 3D structural model.
Sequence
FIMDLLGKIF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C59H93N11O13S1
ARNCEQHPSTWYV
ILF
1196.51
6.75
1
1
7
-0
-1.47
1.630
156.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
0
0.00
0
Residue Composition
number
0
A
0
R
0
N
1
D
0
C
0
E
0
Q
1
G
0
H
2
I
2
L
1
K
1
M
2
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 1 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 2 L: 2 K: 1 M: 1 F: 2 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
10 reviewed residue count
C59H93N11O13S1 sequence-only estimate (linear, free termini)
1196.51 sequence-only estimate (linear, free termini)
6.75 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
-1.47 sequence-only estimate (linear, free termini)
1.630 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.