Back to search

Peptide record

TPDB14109

Antibacterial Antifungal standard
119 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB14109
Antibacterial Antifungal
Anti-infective peptides
dbAMP Peptipedia Antifungipept CAFPdb
standard
No
A 119-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from dbAMP, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
EGGAGGGGAQQCPLGTKLDSCRNYLLDRCTTMKDFPVTWRWWTWWKGGCEELLHDCCSQLSQMPPQCRCNIIQGSIQRDLGGFFGFQRDRTVKVIQAAKNLPPRCNQGPACNIPSTIGY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C575H890N170O167S12
G
13241.15
8.14
14
9
36
+4
1.67
-0.460
60.67
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
31105
2.35
39
Residue Composition
number
5
A
8
R
5
N
6
D
10
C
3
E
10
Q
15
G
1
H
6
I
9
L
5
K
2
M
4
F
8
P
5
S
7
T
5
W
2
Y
3
V
Amino Acid Distribution
A: 5 R: 8 N: 5 D: 6 C: 10 E: 3 Q: 10 G: 15 H: 1 I: 6 L: 9 K: 5 M: 2 F: 4 P: 8 S: 5 T: 7 W: 5 Y: 2 V: 3
Chemical Descriptors
119 reviewed residue count
C575H890N170O167S12 sequence-only estimate (linear, free termini)
13241.15 sequence-only estimate (linear, free termini)
8.14 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.67 sequence-only estimate (linear, free termini)
-0.460 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept