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Peptide record

TPDB14082

Antibacterial Antifungal standard
119 amino acids
Basic Information
3D PDB MODEL
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TPDB14082
Antibacterial Antifungal
Anti-infective peptides
dbAMP Peptipedia Antifungipept CAFPdb
standard
No
A 119-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from dbAMP, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
DVGGGGGSQQCPQERPNLGSCKDYVMERCFTMKDFPVTWPTKWWKGGCEHEVREKCCQQLSQIAPHCRCDAIRGVIQGKLGGIFGIGGGAVFKQIQRAQILPSKCNMGVDCRFPSGYYW
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C577H890N168O163S13
G
13205.22
8.31
17
10
37
+5
1.50
-0.421
56.47
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
27095
2.05
33
Residue Composition
number
4
A
7
R
2
N
5
D
10
C
5
E
10
Q
18
G
2
H
7
I
4
L
8
K
3
M
5
F
7
P
5
S
3
T
4
W
3
Y
7
V
Amino Acid Distribution
A: 4 R: 7 N: 2 D: 5 C: 10 E: 5 Q: 10 G: 18 H: 2 I: 7 L: 4 K: 8 M: 3 F: 5 P: 7 S: 5 T: 3 W: 4 Y: 3 V: 7
Chemical Descriptors
119 reviewed residue count
C577H890N168O163S13 sequence-only estimate (linear, free termini)
13205.22 sequence-only estimate (linear, free termini)
8.31 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
1.50 sequence-only estimate (linear, free termini)
-0.421 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept