Back to search

Peptide record

TPDB14081

Antibacterial standard
133 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB14081
Antibacterial
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 133-aa standard natural antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
DVELKGKGGENEGFVGLKAQRNLYEDDRTSLSGTVKGQSQWKDPYPAQHAGMARLDGTRTLIENDRTKVTGSGFAQREVATGMRPHDSFGVGVEATHNIYKGKNGEVDVFGGVQRQWNTPDRHQARGGIRWRF
Physicochemical Analysis
C638H996N202O199S2
C
G
14744.28
9.81
24
17
40
+3
40.35
-0.957
54.21
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
20970
142.22
31
Residue Composition
number
8
A
12
R
6
N
9
D
0
C
8
E
8
Q
20
G
4
H
3
I
6
L
8
K
2
M
5
F
4
P
5
S
9
T
3
W
3
Y
10
V
Amino Acid Distribution
A: 8 R: 12 N: 6 D: 9 C: 0 E: 8 Q: 8 G: 20 H: 4 I: 3 L: 6 K: 8 M: 2 F: 5 P: 4 S: 5 T: 9 W: 3 Y: 3 V: 10
Chemical Descriptors
133
C638H996N202O199S2
14744.28
9.81
+3
40.35
-0.957
Evidence Records 1 records
Evidence 1 Activity

Activity

Antibacterial

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.
The fraction (peak 1) used to purify this peptide was active against E. coli. Warning: not tested on the purified form yet.